ID/Diagnostic: Multiple
1. Serological: An ELISA test is available for Phytophthora at the genus level for primary screening. A positive does not indicate P. kernoviae.
ID must be confirmed by other methods.
2. Molecular:
PPQ CPHST has validated work instructions available upon request for a real-time PCR (qPCR) for confirmation of P. kernoviae.
Please contact:
Ashlee Barth - USDA-APHIS-PPQ-CPHST
(301) 313-9277
ashlee.k.barth@aphis.usda.gov
Mistaken Identities:
Symptoms in infected hosts are very similar to those of P. ramorum, which infects some of the same hosts. However, P. kernoviae has clear morphological distinctions from P. ramorum (Aleksandrov and Arbuzova, 2012). Compared to P. ramorum, which often occurs in similar habitats in the UK, P. kernoviae is homothallic instead of heterothallic, is papillate instead of semi-papillate, does not produce chlamydospores, and has a longer pedicel length (Dick and Parke, 2012).
P. kernoviae may be distinguished from other homothallic Phytophthora species with caducous, papillate sporangia with medium-length pedicels by its lower optimal temperature (cfr. P. botryosa, and P. hevea); higher optimum temperature (cfr. P. nemerosa), often tapered oogonial stalks (cfr. P. meadii, P. botryosa, P. nemerosa), often asymmetric sporangia (cfr. P. meadii, P. megakarya, P. nemerosa), and longer pedicels (cfr. P. boehmeriae) (Brasier et al., 2005; Dick and Parke, 2012).
Widmer (2010) developed a diagnostic key to differentiate P. kernoviae from other Phytophthora species that infect the foliage of Rhododendron.
In Progress / Literature-based Diagnostics:
Brasier et al. (2005) describe distinct morphological characteristics of P. kernoviae. Phytophthora kernoviae is homothallic and produces amphigynous antheridia and caducous and conspicuously papillate sporangia (Brasier et al, 2005). Phytophthora boehmeriae is the only known species that has the same characters. However, P. kernoviae can be easily separated from P. boehmeriae by shape of oogonial stalks (tapered vs. not tapered) and sporangia (often asymmetric vs. spherical/ovoid) and pedicel length (medium vs. short) (USDA, 2008).
Schlenzig (2011) developed a duplex PCR method, based on the internal transcribed spacer (ITS) regions of the ribosomal DNA, that can simultaneously detect P. kernoviae and P. ramorum. Hughes et al. (2011) developed a TaqMan real-time PCR assay for detection of P. kernoviae that is also based on internal transcribed spacer (ITS) sequence.
Tomlinson et al. (2010) developed a method for nucleic-acid-based detection of P. kernoviae. This method involves extraction of DNA on the nitrocellulose membranes of lateral-flow devices, loop-mediated isothermal amplification (LAMP) of target DNA using labeled primers, and detection of the generically labeled amplification products by a sandwich immunoassay in a lateral-flow-device format. This method is suitable for on-site use.